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International Journals

  • LoViT: Long Video Transformer for surgical phase recognition
    Yang Liu, Maxence Boels, Luis C. Garcia Peraza Herrera, Tom Vercauteren, Prokar Dasgupta, Alejandro Granados, Sebastien Ourselin
    Medical Image Analysis (MedIA), 2024.
    [ link ] [ arXiv ] [ code ]

  • Hyperspectral image segmentation: a preliminary study on the Oral and Dental Spectral Image Database (ODSI-DB)
    Luis C. Garcia Peraza Herrera, Conor Horgan, Sebastien Ourselin, Michael Ebner, Tom Vercauteren
    Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, 2023
    [ link ] [ arXiv ] [ code ]

  • Rapid and robust endoscopic content area estimation: a lean GPU-based pipeline and curated benchmark dataset
    Charlie Budd, Luis C. Garcia Peraza Herrera, Martin Huber, Sebastien Ourselin, Tom Vercauteren
    Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, 2023
    [ link ] [ arXiv ] [ code ]

  • Robotic Endoscope Control via Autonomous Instrument Tracking
    Luis C. Garcia Peraza Herrera*, Caspar Gruijthuijsen*, Gianni Borghesan, Dominiek Reynaerts, Jan Deprest, Sebastien Ourselin, Tom Vercauteren, Emmanuel Vander Poorten
    Frontiers in Robotics and AI, 2022
    [ link ] [ arXiv ] [ code ]

  • A clinically interpretable convolutional neural network for the real-time prediction of early squamous cell cancer of the esophagus: comparing diagnostic performance with a panel of expert European and Asian endoscopists
    Martin A. Everson, Luis C. Garcia Peraza Herrera, Hsiu-Po Wang, Ching-Tai Lee, Chen-Shuan Chung, Ping-Hsin Hsieh, Chien-Chuan Chen, Cheng-Hao Tseng, Ming-Hung Hsu, Tom Vercauteren, Sebastien Ourselin, Sergey Kashin, Raf Bisschops, Oliver Pech, Laurence Lovat, Wen-Lun Wang, Rehan J. Haidry
    Gastrointestinal Endoscopy, 2021
    [ link ]

  • Image compositing for segmentation of surgical tools without manual annotations
    Luis C. Garcia Peraza Herrera, Lucas Fidon, Claudia D'Ettorre, Danail Stoyanov, Tom Vercauteren, Sebastien Ourselin
    IEEE Transactions on Medical Imaging, 2021
    [ link ] [ arXiv ] [ code ]

  • Intrapapillary capillary loop classification in magnification endoscopy: open dataset and baseline methodology
    Luis C. Garcia Peraza Herrera, Martin Everson, Laurence Lovat, Hsiu-Po Wang, Wen Lun Wang, Rehan Haidry, Danail Stoyanov, Sebastien Ourselin, Tom Vercauteren
    International Journal of Computer Assisted Radiology and Surgery, 2020
    [ link ] [ arXiv ] [ code ]

  • Artificial intelligence for the real-time classification of intrapapillary capillary loop patterns in the endoscopic diagnosis of early oesophageal squamous cell carcinoma: A proof-of-concept study
    Martin Everson, Luis C. Garcia Peraza Herrera, Wenqi Li, Imanol Luengo Muntion, Omer Ahmad, Matthew R. Banks, Cormac Magee, Durayd Alzoubaidi, Ming-Hung Hsu, David Graham, Tom Vercauteren, Laurence Lovat, Sebastien Ourselin, Segey Kashin, Hsiu-Po Wang, Wen-Lun Wang, Rehan J. Haidry
    United European Gastroenterology Journal, 2019
    [ link ]

  • GIFT-Grab: Real-time C++ and Python multi-channel video capture, processing and encoding API
    Dzhoshkun Ismail Shakir, Luis C. Garcia Peraza Herrera, Pankaj Daga, Tom Doel, Matthew J. Clarkson, Sebastien Ourselin, Tom Vercauteren
    Journal of Open Research Software, 2017
    [ link ] [ code ]

International Conferences

  • Average Calibration Error: A Differentiable Loss for Improved Reliability in Image Segmentation
    Theodore Barfoot, Luis C. Garcia Peraza Herrera, Ben Glocker, Tom Vercauteren
    Medical Image Computing and Computer Assisted Interventions (MICCAI), 2024
    [ arXiv ]

  • VideoSum: A Python Library for Surgical Video Summarization
    Luis C. Garcia Peraza Herrera, Sebastien Ourselin, Tom Vercauteren
    Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2023
    [ arXiv ] [ code ]

  • Incompressible image registration using divergence-conforming B-splines
    Lucas Fidon, Michael Ebner, Luis C. Garcia Peraza Herrera, Marc Modat, Sebastien Ourselin, Tom Vercauteren
    Medical Image Computing and Computer Assisted Interventions (MICCAI), 2019
    [ link ] [ arXiv ]

  • Toolnet: holistically-nested real-time segmentation of robotic surgical tools
    Luis C. Garcia Peraza Herrera, Wenqi Li, Lucas Fidon, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sebastien Ourselin
    IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS), 2017
    [ link ] [ arXiv ]

  • Scalable multimodal convolutional networks for brain tumour segmentation
    Lucas Fidon, Wenqi Li, Luis C. Garcia Peraza Herrera, Jinendra Ekanayake, Neil Kitchen, Sebastien Ourselin, Tom Vercauteren
    Medical Image Computing and Computer Assisted Interventions (MICCAI), 2017
    [ link ] [ arXiv ]

  • Retrospective head motion estimation in structural brain MRI with 3D CNNs
    Juan Eugenio Iglesias, Garikoitz Lerma-Usabiaga, Luis C. Garcia Peraza Herrera, Sara Martinez, Pedro M. Paz-Alonso
    Medical Image Computing and Computer Assisted Interventions (MICCAI), 2017
    [ link ]

  • Real-time mosaicing of fetoscopic videos using SIFT
    Pankaj Daga, François Chadebecq, Dzhoshkun I. Shakir, Luis C. Garcia Peraza Herrera, Marcel Tella, George Dwyer, Anna L. David, Jan Deprest, Danail Stoyanov, Tom Vercauteren, Sebastien Ourselin
    SPIE Medical Imaging, 2016
    [ link ]

  • Accessible Digital Ophthalmoscopy Based on Liquid-Lens Technology
    Christos Bergeles, Pierre Berthet-Rayne, Philip McCormac, Luis C. Garcia Peraza Herrera, Kosy Onyenso, Fan Cao, Khushi Vyas, Melissa Berthelot, Guang-Zhong Yang
    Medical Image Computing and Computer Assisted Interventions (MICCAI), 2015
    [ link ]

  • Fluidic actuation for intra-operative in situ imaging
    Alain Devreker, Benoit Rosa, Adrien Desjardins, Erwin J. Alles, Luis C. Garcia Peraza Herrera, Efthymios Maneas, Danail Stoyanov, Anna David, Jan Deprest, Sebastien Ourselin, Dominiek Reynaerts, Emmanuel Vander Poorten
    IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS), 2015
    [ link ]

International Workshops

  • Generalised wasserstein dice score for imbalanced multi-class segmentation using holistic convolutional networks
    Lucas Fidon, Wenqi Li, Luis C. Garcia Peraza Herrera, Jinendra Ekanayake, Neil Kitchen, Sebastien Ourselin, Tom Vercauteren
    Medical Image Computing and Computer Assisted Interventions (MICCAI), 2017
    [ link ] [ arXiv ]

  • Real-Time Segmentation of Non-Rigid Surgical Tools based on Deep Learning and Tracking
    Luis C. Garcia Peraza Herrera, Wenqi Li, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sebastien Ourselin
    CARE Workshop held in conjuction with Medical Image Computing and Computer Assisted Interventions (MICCAI), 2016
    Best Paper Award
    [ link ] [ arXiv ]